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Recent News and Articles on the Keywords: structure dna + researchers + structure  Related to the article below (Last Update: 5/5/2008)

Unraveling the Link Between Genes and Environment
Washington Post, United States -
"This may reveal experience-dependent adaptability in the chemistry of the DNA and chromatin structure," researcher Michael Meaney said in a prepared ...
Structure Of Protein That Repairs Damage To Cancer Cells Revealed
Science Daily (press release) - Apr 24, 2008
Many labs have unsuccessfully attempted to solve the structure of the bacterial protein with double-stranded DNA. They failed because this family of ...
Melting Defects Could Lead To Smaller, More Powerful Microchips
Science Daily (press release) -
The plate prevents a molten structure from widening, and keeps its top flat and sides vertical, Chou said. In one experiment, it made the edges of 70 ...
New Technique Yields More Detailed Picture Of Chromatin Structure
Science Daily (press release) - Apr 20, 2008
?We are interested in chromatin structure, so our targets are mostly chromatin-bound proteins,? Kireev said. The researchers had inserted several copies of ...
Blood test can identify Strangles carriers
Horsetalk, New Zealand -
For the past four years, researchers at the Animal Health Trust, have been analysing the genetic structure of Streptococcus equi (S. equi), the bacterium ...
Genetic Breakthrough Explains Dangerously High Blood Glucose Levels
Science Daily (press release) - May 2, 2008
Eventually, we might be able to customize treatment to an individual's unique genetic structure." High blood glucose levels are also closely linked with ...
'Destruct' Triggers May Be Jammed In Tumor Cells, Geneticists Say
Science Daily (press release) - Apr 30, 2008
"If we reverse this and open the DNA supporting structure, we can conceivably make the cells sensitive to radiation once more. ...
Scientists Make Chemical Cousin Of DNA For Use As New ...
Science Daily (press release) - Apr 29, 2008
In the Biodesign Institute at Arizona State University, researchers are using DNA to make intricate nano-sized objects. Working at this scale holds great ...
Thomson Reuters/King's College London Survey Explores UK Research ...
CNNMoney.com (press release) -
... and has played a major role in many of the advances that have shaped modern life, such as the discovery of the structure of DNA. ...PINK:TRINF

Economist
Gene therapy Seeing is believing
Economist, UK - May 1, 2008
They have known the structure of genes, how they replicate, how they are controlled and expressed and, crucially, how to manipulate them. ...
Source: Google News

THE CLASSIC: Molecular Structure of Nucleic Acids: A Structure for Deoxyribose Nucleic Acid. -
JD Watson, FHC Crick - Clinical Orthopaedics and Related Research, 2007 - corronline.com
... Fig. Credit: A. Barr... Fig. Credit: A. Barrington Brown / Photo Researchers,
Inc. The discoverers of the structure of DNA. James ...

Electrostatic manipulation of DNA in microfabricated structures -
M Washizu, O Kurosawa - Industry Applications, IEEE Transactions on, 1990 - ieeexplore.ieee.org
... developed T by the authors and their co-researchers for the ... DNA?s. This choice was
made because DNA?s have clearly defined structure, because high ...

The study of correlation structures of DNA sequences: a critical review -
W Li - Computers and Chemistry, 1997 - Elsevier
... particular aspect of the correlation structure of DNA sequences in relation to a
particular biological question. For mathematically oriented researchers, a DNA ...

… -associated repetitive element: Implications for a role of chromatin structure in the pathogenesis … -
ST Winokur, U Bengtsson, J Feddersen, KD Mathews, … - Chromosome Research, 1994 - Springer
Page 1. Chromosome Research 1994, 2, 225-234 The DNA rearrangement associated with
facioscapulohumeral ... chromatin structure in the pathogenesis of the disease ...

Social structure of pilot whales revealed by analytical DNA profiling -
B Amos, C Schlotterer, D Tautz - Science, 1993 - sciencemag.org
... 1993 Social Structure of Pilot Whales Revealed by Analytical DNA Profiling
Bill Amos,* Christian Schlktterer, Diethard Tautz Long ...

Deoxyribonucleic acid loop domain tertiary structure in mammalian spermatozoa. -
WS Ward - Biol Reprod, 1993 - ncbi.nlm.nih.gov
... In the four decades since the discovery of the basic structure of the DNA double
helix, researchers have been investigating the more dynamic tertiary ...

Structure, Stability, and Thermodynamics of Lamellar DNA-Lipid Complexes -
D Harries, S May, WM Gelbart, A Ben-Shaul - Biophysical Journal, 1998 - Biophysical Soc
... difficult to imagine a biological structure or process ... interaction of specific proteins
with DNA, and with cell membranes, have inspired researchers to focus a ...

Interfaces Between the Detection, Signaling, and Repair of DNA Damage -
J Rouse, SP Jackson - Science, 2002 - sciencemag.org
... on mechanisms that integrate these processes will provide exciting new directions
for research. Determining the precise structures with which DNA repair and ...

The Crystal Structure of CCATTAATGG Implications for Bending of B-DNA at TA Steps -
DS Goodsell, M Kaczor-Grzeskowiak, RE Dickerson - Journal of Molecular Biology, 1994 - ingentaconnect.com
... be a significant factor in macroscopic DNA curvature induced ... A-tracts is contradicted
by every crystal structure analysis, and ... Document Type: Research article. ...

[PDF] Programmed Materials Synthesis with DNA -
JJ Storhoff, CA Mirkin - DNA, 1849 - cs.duke.edu
... the construction of DNA-based materials with identifiable and ration- ally designable
structures. In addition, using gel electrophoresis, the researchers have ...
-

Source: Google Scholar

Researchers solve first structure of a key to intact DNA inheritance

Bacteria, including S. aureas, use mechanism to spread antibiotic resistance

HOUSTON - Researchers have solved the structure of a DNA-protein complex that is crucial in the spread of antibiotic resistance among bacteria. Knowing this structure also provides fundamental insight into how cells successfully divide into two new cells with intact DNA

The report in the Dec. 20th issue of Nature focuses on how DNA separates and maintains its integrity when a cell divides. Using X-ray crystallography, the team led by structural biologists at The University of Texas M. D. Anderson, with colleagues at the University of Sydney, Australia, produced clear 3-D images of the structure that results when two proteins connect with a DNA site to "segregate" DNA during cell division.

"We solve structures to answer questions about how molecules carry out their biological functions. Without knowing the structure, you can't understand molecular mechanisms at a detailed level," says lead author Maria Schumacher, Ph.D., associate professor in M. D. Anderson's Department of Biochemistry and Molecular Biology.

In this case, Schumacher and colleagues answer a basic science question and flag a possible target for clinical attack on antibiotic-resistant Staphlococcus Aureas, a tenacious and often lethal staph infection.

"The plasmid segregation system we are working on, called pSK41, is found in S. aureus and confers resistance to multiple antibiotics, including the drug of last resort, vancomycin," Schumacher says. "Because the segregation systems are essential for the retention of these multidrug resistant plasmids, they represent wonderful drug targets."

Plasmids are additional strips or circles of DNA found in bacteria that provide the bacterium with some mechanism of defense - in this case, protection against antibiotics. Plasmids can be transferred from one type of bacteria to another through a number of mechanisms.

Plasmids are also a great model for understanding cell division and segregation, Schumacher says, because plasmid segregation is relatively simple: two proteins connect to one DNA site to launch the process. Cells divide to multiply and it's crucial for this split to go smoothly so each daughter cell ends up with the DNA it needs to function.

"If these plasmids don't divide and go to the next generation of cells, those bacteria cells lose their drug resistance," Schumacher notes.

In the Nature paper, the scientists capture the first structure ever solved of a segrosome complex that partitions and divides DNA.

A protein called ParR connects with a centromere DNA site, a round string of DNA repeats in the plasmid, to form the segrosome complex, which then completes itself by attracting filaments of another protein called ParM. The ParM filaments grow, literally pushing the two replicated plasmid segrosomes apart, resulting in two copies of the plasmid with intact DNA.

"An important question in segregation biology has been 'what structure does the segrosome adopt"' Our segrosome structure answers that question. We now have a molecular model for the segregation of DNA," Schumacher says.

Solving the structure is necessary to understand how these molecules function. "If we know these details we can design highly specific drugs to disrupt their actions," Schmacher notes.

The researchers used a technique called X-ray crystallography to discern the structure of both proteins connecting to the plasmid DNA. This technique first requires purification and crystallization of the protein or, in this case, the more challenging DNA-protein complex structure. These are usually the most difficult steps of the process.

Next, the crystal sample is mounted on a tiny loop in an X-ray diffractor and X-rays are beamed through it. Bending around the lattice of atoms in the crystal, the X-rays produce a diffraction pattern, which can be seen as a dot pattern on a monitor.

A state-of-the-art X-ray diffractor shoots a different angle of the crystallized protein every few minutes. Taking between 180-300 images will produce 100,000 to 300,000 data points.

Mathematical analysis of those points reveals a three-dimensional structure. The first image is an electron density map, which illustrates a protein's hills and valleys based on the position of the electrons of the atoms that compose the complex. This leads to the more exotic ribbon diagram, a spiraling, looping almost skeletal representation of the complex's crucial components.

###

The researchers used the Advanced Light Source (ALS) synchrotron at the U.S. Department of Energy's Lawrence Berkeley National Laboratory a fast, powerful diffractor that shoots a new diffraction pattern every half second, to solve this structure.

Co-authors with Schumacher are Tiffany Glover and Thomas Dunham, also of M. D. Anderson's Department of Biochemistry and Molecular biology; and Anthony J. Brzoska, Slade O. Hensen, Ronald Skurray and Neville Firth, all of the University of Sydney.

The research was supported by a Burroughs Wellcome Career Development Award, an M. D. Anderson Trust Fellowship, a National Institutes of Health grant, an Australian Research Council Grant and an Australian National Health and Medical Research Council Project grant.

 
 
 
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